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    <title>Analytical Spectroscopy</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/" />
    <link rel="self" type="application/atom+xml" href="http://blog.lib.umn.edu/chaynes/8152/atom.xml" />
   <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839</id>
    <link rel="service.post" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839" title="Analytical Spectroscopy" />
    <updated>2009-11-25T17:43:20Z</updated>
    <subtitle></subtitle>
    <generator uri="http://www.sixapart.com/movabletype/">Movable Type 4.25</generator>
 

<entry>
    <title>Sample White Paper/Experimental Outline</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/sample_white_paperexperimental.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=98311" title="Sample White Paper/Experimental Outline" />
    <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839.98311</id>
    
    <published>2009-11-25T19:41:33Z</published>
    <updated>2009-11-25T17:43:20Z</updated>
    
    <summary>As promised, here is an example of a white paper and outline from a previous class: Download file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Administrative" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>As promised, here is an example of a white paper and outline from a previous class: <a href="http://blog.lib.umn.edu/chaynes/8152/Davis_white_paper.pdf">Download file</a>.</p>

<p><br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Minute Papers Due 11/27/2009</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/minute_papers_due_12082006.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=49940" title="Minute Papers Due 11/27/2009" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.49940</id>
    
    <published>2009-11-25T16:46:00Z</published>
    <updated>2009-11-25T17:42:02Z</updated>
    
    <summary>Please post this week&apos;s minute papers as &quot;comments&quot; to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate&apos;s posts....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Minute Papers" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>Please post this week's minute papers as "comments" to this post.  Minute papers should be posted by 5 pm on Friday.  Feel free to read your classmate's posts.</p>]]>
        
    </content>
</entry>

<entry>
    <title>Raman</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/raman.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=50119" title="Raman" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.50119</id>
    
    <published>2009-11-25T14:04:25Z</published>
    <updated>2009-11-25T17:50:57Z</updated>
    
    <summary>There is an article to read for the Raman spectroscopy section of class. You should read &quot;Raman microscopy techniques for the characterisation of pigments&quot;by Robin J. H. Clark and coworkers before class on 11/30/09. Discussion Questions: 1. What are the...</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Papers to Read" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>There is an article to read for the Raman spectroscopy section of class.</p>

<p>You should read <span class="mt-enclosure mt-enclosure-file" style="display: inline;"><a href="http://blog.lib.umn.edu/chaynes/8152/Clark%20Raman.pdf">"Raman microscopy techniques for the characterisation of pigments"</a></span>by Robin J. H. Clark and coworkers before class on 11/30/09.</p>

<p><strong>Discussion Questions:</strong></p>

<p>1.  What are the advantages and disadvantages of using Raman scattering to study important historical artifacts?</p>

<p>2.  What is the purpose of the interference filter, the spatial filter, and the double monochromator in the common Raman instrumentation described?</p>

<p>3.  In one described example, why are some of the white features in the text turning black?  How was this revealed?  Where would you find the Raman bands relevant for this discovery?</p>

<p>4.  Can you think of other sample types where non-destructive Raman analysis would be particularly applicable?</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 30 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_33_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=61086" title="Lecture 30 Notes" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.61086</id>
    
    <published>2009-11-24T22:26:11Z</published>
    <updated>2009-11-24T22:36:47Z</updated>
    
    <summary>Download the pdf file. Download the powerpoint file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture30_clh_class.pdf">Download the pdf file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture30_clh_class.ppt">Download the powerpoint file.</a><br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Proposal Idea Discussion</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/proposal_discussion.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=175176" title="Proposal Idea Discussion" />
    <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839.175176</id>
    
    <published>2009-11-23T15:50:05Z</published>
    <updated>2009-11-23T17:49:23Z</updated>
    
    <summary>Just a reminder that you should come to class Wednesday with a preliminary concept for your proposal. Please keep in mind that your goal is to identify an important question/problem/hypothesis that can be investigated using an analytical spectroscopy/spectrometry technique or...</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Administrative" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>Just a reminder that you should come to class Wednesday with a preliminary concept for your proposal.  Please keep in mind that your goal is to identify an important question/problem/hypothesis that can be investigated using an analytical spectroscopy/spectrometry technique or techniques.  Please verify that the work you propose has not already been done in the literature.  Please keep in mind that the project scope is 3 years.</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 29 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_32_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=60587" title="Lecture 29 Notes" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.60587</id>
    
    <published>2009-11-22T22:51:18Z</published>
    <updated>2009-11-23T00:32:14Z</updated>
    
    <summary>Download the pdf file. Download the powerpoint file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture29_clh_class.pdf">Download the pdf file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture29_clh_class.ppt">Download the powerpoint file.</a><br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Luminescence</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/luminescence.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=50117" title="Luminescence" />
    <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839.50117</id>
    
    <published>2009-11-20T14:40:16Z</published>
    <updated>2009-11-23T14:53:58Z</updated>
    
    <summary>There are two Analytical Chemistry A-Pages articles to read for the luminescence section of class. You should read both before class on 11/23/09 You should read &quot;Oxygen Sensors Based on Luminescence Quenching&quot;by James N. Demas and coworkers. Discussion Questions for...</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Papers to Read" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>There are two Analytical Chemistry A-Pages articles to read for the luminescence section of class.  You should read both before class on 11/23/09</p>

<p>You should read <span class="mt-enclosure mt-enclosure-file" style="display: inline;"><a href="http://blog.lib.umn.edu/chaynes/8152/Analytical.pdf">"Oxygen Sensors Based on Luminescence Quenching"</a></span>by James N. Demas and coworkers.</p>

<p><strong>Discussion Questions for "Oxygen Sensors Based on Luminescence Quenching"</strong></p>

<p>1.  According to the Stern-Volmer expressions, what combination of rate constants will yield the highest sensitivity quenching sensor?</p>

<p>2.  Why is it important that the quencher molecule have a significant Stokes shift?</p>

<p>3.  Why is it advantageous to use a fluorophore with a long lifetime in oxygen sensor applications?</p>

<p>4.  Come up with one experimental scenario not discussed within this paper where a luminescence-based oxygen sensor would be useful?</p>

<p><br />
You should read <a href="http://pubs.acs.org/doi/abs/10.1021/ac031398v">"Analytical Bioluminescence and Chemiluminscence"</a>.</p>

<p><strong>Discussion Questions for "Analytical Bioluminescence and Chemiluminescence"</strong></p>

<p>1.  What molecule(s) could be sensed quantitatively using a luciferin/luciferase reaction?</p>

<p>2.  What are the advantages and disadvantages of chemiluminescence compared to fluorescence?</p>

<p>3.  What is the difference between FRET and BRET?</p>

<p>4.  What are the major challenges to performing in vivo spectroscopic imaging?</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 28 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_31_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=60457" title="Lecture 28 Notes" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.60457</id>
    
    <published>2009-11-19T18:27:08Z</published>
    <updated>2009-11-19T15:04:09Z</updated>
    
    <summary>Download the pdf file. Download the powerpoint file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture28_clh_class.pdf">Download the pdf file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture28_clh_class.ppt">Download the powerpoint file.</a></p>]]>
        
    </content>
</entry>

<entry>
    <title>Minute Papers Due 11/20/2009</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/minute_papers_due_12012006.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=49939" title="Minute Papers Due 11/20/2009" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.49939</id>
    
    <published>2009-11-19T13:45:17Z</published>
    <updated>2009-11-19T14:36:02Z</updated>
    
    <summary>Please post this week&apos;s minute papers as &quot;comments&quot; to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate&apos;s posts....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Minute Papers" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>Please post this week's minute papers as "comments" to this post.  Minute papers should be posted by 5 pm on Friday.  Feel free to read your classmate's posts.</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 27 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_30_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=60224" title="Lecture 27 Notes" />
    <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839.60224</id>
    
    <published>2009-11-17T22:19:30Z</published>
    <updated>2009-11-16T22:35:15Z</updated>
    
    <summary>The lectures on the topic of luminescence will be given by guest lecturer Secil Koseoglu. Download the first powerpoint file. Download the pdf file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>The lectures on the topic of luminescence will be given by guest lecturer Secil Koseoglu.</p>

<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture27_clh_class.ppt">Download the first powerpoint file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture27_clh_class.pdf">Download the pdf file.</a></p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 26 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_29_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=60113" title="Lecture 26 Notes" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.60113</id>
    
    <published>2009-11-15T18:12:08Z</published>
    <updated>2009-11-15T19:14:34Z</updated>
    
    <summary>Download the pdf file. Download the powerpoint file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture25_clh_class.pdf">Download the pdf file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture25_clh_class.ppt">Download the powerpoint file.</a><br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 25 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_28_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=59849" title="Lecture 25 Notes" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.59849</id>
    
    <published>2009-11-12T21:45:22Z</published>
    <updated>2009-11-11T22:50:39Z</updated>
    
    <summary>We will continue on with the notes posted for lecture 24....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>We will continue on with the notes posted for lecture 24.<br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Minute Papers Due 11/13/2009</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/minute_papers_due_11172006.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=49938" title="Minute Papers Due 11/13/2009" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.49938</id>
    
    <published>2009-11-11T22:44:06Z</published>
    <updated>2009-11-11T22:52:22Z</updated>
    
    <summary>Please post this week&apos;s minute papers as &quot;comments&quot; to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate&apos;s posts....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Minute Papers" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>Please post this week's minute papers as "comments" to this post.  Minute papers should be posted by 5 pm on Friday.  Feel free to read your classmate's posts.</p>]]>
        
    </content>
</entry>

<entry>
    <title>Lecture 24 Notes</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/lecture_27_notes.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=59358" title="Lecture 24 Notes" />
    <id>tag:blog.lib.umn.edu,2009:/chaynes/8152//3839.59358</id>
    
    <published>2009-11-11T01:29:07Z</published>
    <updated>2009-11-10T22:05:56Z</updated>
    
    <summary>Download the pdf file. Download the powerpoint file....</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Lecture Notes" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p><a href="http://blog.lib.umn.edu/chaynes/8152/Lecture24_clh_class.pdf">Download the pdf file.</a><br />
<a href="http://blog.lib.umn.edu/chaynes/8152/Lecture24_clh_class.ppt">Download the powerpoint file.</a><br />
</p>]]>
        
    </content>
</entry>

<entry>
    <title>Infrared</title>
    <link rel="alternate" type="text/html" href="http://blog.lib.umn.edu/chaynes/8152/2009/11/infrared.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blog.lib.umn.edu/cgi-bin/mt-atom.cgi/weblog/blog_id=3839/entry_id=50118" title="Infrared" />
    <id>tag:blog.lib.umn.edu,2006:/chaynes/8152//3839.50118</id>
    
    <published>2009-11-09T20:01:46Z</published>
    <updated>2009-11-09T21:22:26Z</updated>
    
    <summary>There is an Analytical Chemistry A-Pages articles to read for the infrared spectroscopy section of class. You should read &quot;IR Spectroscopy: Clinical and Diagnostic Applications&quot; by Janie Dubois and coworkers before class on 11/13/09. Discussion Questions for &quot;IR Spectroscopy -...</summary>
    <author>
        <name>Christy Haynes</name>
        <uri></uri>
    </author>
    
        <category term="Papers to Read" />
    
    <content type="html" xml:lang="en" xml:base="http://blog.lib.umn.edu/chaynes/8152/">
        <![CDATA[<p>There is an Analytical Chemistry A-Pages articles to read for the infrared spectroscopy section of class.</p>

<p>You should read <a href="http://pubs.acs.org/doi/pdf/10.1021/ac041647v">"IR Spectroscopy: Clinical and Diagnostic Applications"</a> by Janie Dubois and coworkers before class on 11/13/09.</p>

<p><strong>Discussion Questions for "IR Spectroscopy - Clinical and Diagnostic Applications":</strong></p>

<p>1.  What artifacts might be introduced while performing IR absorption measurements of biological fluids?</p>

<p>2.  Where are the major biological IR absorption bands?</p>

<p>3.  Is infrared absorption spectroscopy a good method to diagnose arthritis?  Do infrared absorption spectroscopy diagnostics give information about the cause or progression of the disease?</p>

<p>4.  Compare FT-IR and IR microscopy as diagnostic/clinical tools.</p>

<p>5.  What is the diffraction limited spatial resolution in mid-IR absorption spectroscopy?  Is this sufficient to probe biological tissue?<br />
</p>]]>
        
    </content>
</entry>

</feed> 

