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November 25, 2009

Minute Papers Due 11/27/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

November 19, 2009

Minute Papers Due 11/20/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

November 11, 2009

Minute Papers Due 11/13/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

November 6, 2009

Minute Papers Due 11/06/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

October 29, 2009

Minute Papers Due 10/30/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

October 22, 2009

Minute Papers Due 10/25/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 12 pm on Sunday (this week only). Feel free to read your classmate's posts.

October 14, 2009

Minute Papers Due 10/16/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

October 7, 2009

Minute Papers Due 10/09/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

September 30, 2009

Minute Papers Due 10/02/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

September 23, 2009

Minute Papers Due 09/25/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

September 16, 2009

Minute Papers Due 09/18/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by 5 pm on Friday. Feel free to read your classmate's posts.

September 11, 2009

Minute Papers Due 09/11/2009

Please post this week's minute papers as "comments" to this post. Minute papers should be posted by midnight on Friday. Feel free to read your classmate's posts.

September 9, 2009

Example Minute Paper

Minute Paper #1 (09/04/2007) - Christy L. Haynes

Title: In Vivo Detection of Gold-Imidazole Self-Assembly Complexes: NIR-SERS Signal Reporters
By: G. R. Souza et al.
Journal: Analytical Chemistry

In this paper, the authors attempt to control aggregation of Au nanoparticles by adding imidazole in order to shift the nanoparticle optical properties so that high surface-enhanced Raman scattering (SERS) enhancement factors can be achieved with near-IR laser excitation. The techniques used in this work include: nanoparticle synthesis, UV-vis extinction spectroscopy, transmission electron microscopy, dynamic light scattering, and near-IR SERS.

The authors claim that adding specific concentrations of imidazole (with 2 available nitrogens for covalent attachment to Au) to Au nanoparticles generates nanoparticle aggregates with discrete sizes and optical properties. Individual Au nanoparticles absorb and scatter light at 520 nm; however, the authors need the optical properties to shift to the NIR in order to achieve large SERS enhancement factors in the "water window" (700 - 900 nm) for biological imaging. SERS enhancement factors are largest when the laser excitation wavelength matches the surface-enhancing substrate's optical properties. After aggregating the nanoparticles, the authors calculate their SERS enhancement factors to be as large as 10^9. This is a much larger than expected enhancement factor for spherical gold nanoparticles. The authors then inject the nanoparticle aggregates into mouse tumors and demonstrate that they can collect SERS spectra through the skin of the mouse.

The authors leave many questions unanswered in this work. In figure 1a, you see that the normal Raman scattering and SERS spectra are very different. This is expected because normal Raman scattering reports the vibrational structure of the bulk imidazole in solution while the SERS spectrum reveals the molecules covalently bound to the Au surface. In figure 1b, you can not see the red-shift in the optical properties very easily because the post-aggregation spectrum has very low intensity. This suggests that the nanoparticles are aggregating to the point where they precipitate out of solution. Also, the authors continually report the nanoparticles extinction at 520 nm (the absorption band for the original unaggregated Au nanoparticle solution) even though the most useful information would be the extinction efficiency at 785 nm (since this is the laser excitation they plan to use). Further, the calculated enhancement factors seem way too high based on previous literature precedent - this leads me to believe that their molecular coverage calculations are not correct. They should do a quantitative coverage measurement in order to conclusively demonstrate the claimed enhancement factor. Finally, while the authors show that you can collect SERS spectra through skin, the signals are very small and they do not explain how this will be used in actual biological imaging.

Minute Paper Guidelines

The purpose of the "Minute Paper" assignments is to promote your exposure to the scientific literature. Each week, you will choose an article from the ASAP alerts that is relevant to this class to read critically. Then, you will write a short summary of the paper you chose and post it as a "comment" under that week's minute paper blog post. It is OK if multiple people choose the same paper but your minute papers must be written individually.

The minute paper should be grammatically correct, written in your own words, and no longer than 500 words. Make sure to include the title, authors, and a link to the journal article. You should emphasize the technique that was used and the major findings of the work. Every minute paper should also include your own ideas about other experiments that could be done to continue or improve the presented work.

Each week, a minute paper is due by Friday at 5 pm (though I will accept them until midnight the first week). I will read the minute papers and give feedback. There will be a total of 14 minute papers during the course of the semester - you must complete at least 10 of them on time in order to receive full credit.